Absolutely everything what IR35 Avoider said ^^.
Use company contributions direct to the SIPP provider, max £50k per tax year.
Pay it all in one lump sum if you wish, call it an annual 'bonus' if you like, once profit is known.
Also why £12k salary? Optimum is usually ~£7.5k salary, dividends up to high rate threshold, then company pension contributions after that. Don't forget the ~£11k ISA allowance you have as well, generally preferable to use this up before considering the SIPP.
A few links supporting what IR35 Avoider said (from my own bookmark list):
HM Revenue & Customs: BIM46001: Specific Deductions: Registered Pension Schemes
Specific deductions: registered pension schemes: wholly & exclusively: controlling directors & shareholders
'Wholly & exclusively' rule is limited - HMRC | PCG
Originally posted by IR35 Avoider
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HTH.
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